-
1.
Bioremediation of an agricultural saline soil contaminated with endosulfan and Escherichia coli by an active surface agent induced in a Penicillium crustosum culture.
Landa-Faz, A, Rodríguez-Vázquez, R, Roldán-Carrillo, TG, Hidalgo-Lara, ME, Aguilar-López, R, Cebrián-García, ME
Preparative biochemistry & biotechnology. 2022;(3):292-301
Abstract
This study evaluates the production of a biological active surface agent (BASA) through its surface tension (ST) and emulsifying activity (E24) for endosulfan degradation (ED) and Escherichia coli growth inhibition (EcGI) in an agricultural saline soil. The fungus, identified as Penicillium crustosum was isolated from the Citrus sinensis peel (CsP), then the surface properties were evaluated in 9 culture media through a Taguchi L9 experimental design. The culture conditions included: stirring speed, pH, carbon (C) and nitrogen (N) sources; being glucose, NH4N03, 120 rpm and pH of 5, the most significant parameters in the BASA production. The BASA identified as a lipopeptide type, showed a ST = 38 mN m-1 and E24=71%. Both properties were stable at 80 °C, while ST presented stability in the pH range of 2 - 12, and a saline concentration of 200 g L-1; E24 was also stable at a pH between 8-12. Further application of BASA and fungal inoculum to a contaminated agricultural saline soil presented an EcGI of 99.8% on the 8th day, and ED of 92.9 ± 4.7% in 30 days, respectively; being the first report that uses this fungus for pesticide and bacteria elimination from an agricultural saline soil.
-
2.
Influence mechanism of structure on shear mechanical deformation characteristics of loess-steel interface.
Wei, YZ, Yao, ZH, Chong, XL, Zhang, JH, Zhang, J
PloS one. 2022;(2):e0263676
Abstract
The mechanical properties of loess-steel interface are of great significance for understanding the residual strength and deformation of loess. However, the undisturbed loess has significant structural properties, while the remolded loess has weak structural properties. There are few reports on the mechanical properties of loess-steel interface from the structural point of view. This paper focused on the ring shear test between undisturbed loess as well as its remolded loess and steel interface under the same physical mechanics and test conditions (water content, shear rate and vertical pressure), and explored the influence mechanism of structure on the mechanical deformation characteristics of steel-loess interface. The results show that the shear rate has little effect on the residual strength of the undisturbed and remolded loess-steel interface. However, the water content has a significant influence on the residual strength of the loess-steel interface, moreover, the residual internal friction angle is the dominant factor supporting the residual strength of the loess-steel interface. In general, the residual strength of the undisturbed loess-steel interface is greater than that of the remolded loess specimen (for example, the maximum percentage of residual strength difference between undisturbed and remolded loess specimens under the same moisture content is 6.8%), which is because that compared with the mosaic arrangement structure of the remolded loess, the overhead arrangement structure of the undisturbed loess skeleton particles makes the loess particles on the loess-steel interface re-adjust the arrangement direction earlier and reach a stable speed relatively faster. The loess particles with angular angles in the undisturbed loess make the residual internal friction between the particles greater than the smoother particles of the remolded loess (for example, the maximum percentage of residual cohesion difference between undisturbed and remolded loess specimens under the same vertical pressure is 4.29%), and the intact cement between undisturbed loess particles brings stronger cohesion than the remolded loess particles with destroyed cement (for example, the maximum difference percentage of residual cohesion between undisturbed and remolded soil specimens under the same vertical pressure is 33.80%). The test results provide experimental basis for further revealing the influence mechanism of structure, and parameter basis for similar engineering construction.
-
3.
The Influence of Environmental Conditions on Secondary Metabolites in Medicinal Plants: A Literature Review.
Pant, P, Pandey, S, Dall'Acqua, S
Chemistry & biodiversity. 2021;(11):e2100345
Abstract
Medicinal plants, a source of different phytochemical compounds, are now subjected to a variety of environmental stresses during their growth and development. Different ecologically limiting factors including temperature, carbon dioxide, lighting, ozone, soil water, soil salinity and soil fertility has significant impact on medicinal plants' physiological and biochemical responses, as well as the secondary metabolic process. Secondary metabolites (SMs) are useful for assessing the quality of therapeutic ingredients and nowadays, these are used as important natural derived drugs such as immune suppressant, antibiotics, anti-diabetic, and anti-cancer. Plants have the ability to synthesize a variety of secondary metabolites to cope with the negative effects of stress. Here, we focus on how individual environmental variables influence the accumulation of plant secondary metabolites. A total of 48 articles were found to be relevant to the review topic during our systematic review. The review showed the influence of different environmental variables on SMs production and accumulation is complex suggesting the relationship are not only species-specific but also related to increases and decline in SMs by up to 50 %. Therefore, this review improves our understanding of plant SMs ability to adapt to key environmental factors. This can aid in the efficient and long-term optimization of cultivation techniques under ambient environmental conditions in order to maximize the quality and quantity of SMs in plants.
-
4.
Morel Production Related to Soil Microbial Diversity and Evenness.
Tan, H, Liu, T, Yu, Y, Tang, J, Jiang, L, Martin, FM, Peng, W
Microbiology spectrum. 2021;(2):e0022921
Abstract
Black morel is a widely prized ascomycetous mushroom with culinary value. It was once uncultivable but can now be cultivated routinely in ordinary farmland soils. Large-scale morel farming sometimes encounters nonfructification for unknown reasons. In spring 2020, many morel farms in the area of Chengdu-Plain, China, exhibited no fructification at all, causing disastrous economic loss to the farmers. To determine potential ecological factors associated with the different performance of morel production in these farms, 21 affected sites versus 11 sites with normal fructification performance were analyzed to compare soil microbiota and physiochemical characteristics during fructification. The results indicated that soil physiochemical characteristics were unlikely to be a major reason for the difference between successful fructification and nonfructification. The soils with successful fructification had significantly higher diversity in both the fungal and bacterial communities than those with nonfructification. Morel yield was positively correlated with the α-diversity of fungal communities. The higher diversity of the successfully fructified soils was contributed by community evenness rather than taxonomic richness. In contrast, most nonfructification soils were dominated by a high proportion of a certain fungal genus, typically Acremonium or Mortierella, in the fungal communities. Our findings demonstrate the importance of microbial ecology to the large-scale agroindustry of soil-cultivated mushrooms. IMPORTANCE Saprotrophic mushrooms cultivated in soils are subject to complex influences from soil microbial communities. Research on growing edible mushrooms has revealed connections between fungi and a few species of growth-promoting bacteria colonizing the mycosphere. The composition and diversity of the whole microbial community may also have an influence on the growth and production of soil-saprotrophic mushrooms. Morel mushrooms (Morchella spp.) are economically and culturally important and are widely prized throughout the world. This study used the large-scale farming of morels as an example of an agroecosystem for soil-saprotrophic mushroom cultivation. It demonstrated a typical pattern of how the microbial ecology in soil agroecosystems, especially the α-diversity level and community evenness among soil fungal taxa, could affect the production of high-value cash crops and the income of farmers.
-
5.
Effects of biological nitrification inhibitors on nitrogen use efficiency and greenhouse gas emissions in agricultural soils: A review.
Wang, X, Bai, J, Xie, T, Wang, W, Zhang, G, Yin, S, Wang, D
Ecotoxicology and environmental safety. 2021;:112338
Abstract
To maintain and increase crop yields, large amounts of nitrogen fertilizers have been applied to farmland. However, the nitrogen use efficiency (NUE) of chemical fertilizer remains very low, which may lead to serious environmental problems, including nitrate pollution, air quality degradation and greenhouse gas (GHG) emissions. Nitrification inhibitors can alleviate nitrogen loss by inhibiting nitrification; thus, biological nitrification inhibition by plants has gradually attracted increasing attention due to its low cost and environmental friendliness. Research progress on BNI is reviewed in this article, including the source, mechanisms, influencing factors and application of BNIs. In addition, the impact of BNI on agriculture and GHG emissions is summarized from the perspective of agricultural production and environmental protection, and the key future research prospects of BNIs are also noted.
-
6.
Remediation of soil cadmium pollution by biomineralization using microbial-induced precipitation: a review.
Zheng, Y, Xiao, C, Chi, R
World journal of microbiology & biotechnology. 2021;(12):208
Abstract
In recent years, with industrial pollution and the application of agricultural fertilizers with high cadmium (Cd) content, soil Cd pollution has become increasingly serious. A large amount of Cd is discharged into the environment, greatly endangering the stability of the ecological environment and human health. The use of microorganisms to induce Cd precipitation and mineralization is an important bioremediation method. Itis highly efficient, has a low cost, enables environmental protection, and convenient to operate. This article summarizes the pollution status, pollution source, biological toxicity and existing forms of Cd, as well as the biomineralization mechanism of microbial induced Cd(II) precipitation, mainly including microbial-induced carbonate precipitation, microbial-induced phosphate precipitation and microbial-induced sulfide precipitation. Factors affecting the bioremediation of Cd, such as pH, coexisting ions, and temperature, are introduced. Finally, the key points and difficulties of future microbe-induced Cd(II) biomineralization research are highlighted, providing a scientific basis and theoretical guidance for the application of microbe-induced Cd(II) immobilization in soil.
-
7.
Variability in plant trace element uptake across different crops, soil contamination levels and soil properties in the Xinjiang Uygur Autonomous Region of northwest China.
Liu, W, Yang, X, Duan, L, Naidu, R, Yan, K, Liu, Y, Wang, X, Gao, Y, Chen, Y
Scientific reports. 2021;(1):2064
Abstract
This study investigated contamination status of eight trace elements (As, Cd, Cr, Hg, Pb, Cu, Zn and Ni) in farmland soils and crops at 535 sites across the Xinjiang Uygur Autonomous Region, Northwest China. Land use types of the sampling sites included vegetable patch, grain field and orchard. Our experimental results indicated all farmland soils were considered as trace element contamination based on the Nemerow comprehensive pollution index (NCPI > 1). However, 91.97% of the crop samples were uncontaminated according to the Chinese Risk Control Standard. Soils from the vegetable patch showed higher pollution level comparison with that from grain field and orchard. Health risks for both non-carcinogenic and carcinogenic risks were calculated through crop ingestion exposure pathway. Grain samples showed highest health risks, followed by melon and fruit, and vegetables. The health risks of crops were mainly driven by Cr and Cd. Crop consumption may pose risks for children but not adults. The source of trace element contamination in the different farmland soils varied and may be attributed to the different agricultural activities. Plant type had a greater influence on the trace element accumulation in crops compared with soil trace element contents and physicochemical properties.
-
8.
Quantification of Phytophthora infestans population densities and their changes in potato field soil using real-time PCR.
Osawa, H, Suzuki, N, Akino, S, Araki, H, Asano, K, Akai, K, Kondo, N
Scientific reports. 2021;(1):6266
Abstract
Tuber infection of Phytophthora infestans often occurs at harvest. However, it is difficult to accurately estimate the population densities of P. infestans in soil, especially Japanese soil. In the present study, P. infestans DNA was extracted from soil samples using a modified CTAB-bead method and quantified using real-time PCR to accurately, rapidly and easily estimate the P. infestans population densities in upland soils in Japan. P. infestans was well quantified in eleven types of soil samples, including nine types of upland soils in Japan, that were artificially inoculated with a zoosporangia suspension. The amounts of P. infestans DNA estimated by the real-time PCR were proportional to the inoculum densities. In the non-controlled experimental potato field, P. infestans population densities in soil corresponded to the development of symptoms and were correlated with the number of lesions on the potato foliage. These results imply that the proposed real-time PCR assay is suitable for the estimation or monitoring of P. infestans population densities in upland soils in Japan. The population densities at the ridge bottoms were larger than those at any other location in commercial potato fields. These results were similar to those of a previous report using a bioassay. Moreover, a correlation between DNA quantity and inoculum potential was observed. In conclusion, the real-time PCR assay developed in this study is suitable for indirect estimation of the inoculum potential of P. infestans.
-
9.
Linking plant and soil indices for water stress management in black gram.
Khorsand, A, Rezaverdinejad, V, Asgarzadeh, H, Majnooni-Heris, A, Rahimi, A, Besharat, S, Sadraddini, AA
Scientific reports. 2021;(1):869
Abstract
Measurement of plant and soil indices as well as their combinations are generally used for irrigation scheduling and water stress management of crops and horticulture. Rapid and accurate determination of irrigation time is one of the most important issues of sustainable water management in order to prevent plant water stress. The objectives of this study are to develop baselines and provide irrigation scheduling relationships during different stages of black gram growth, determine the critical limits of plant and soil indices, and also determine the relationships between plant physiology and soil indices. This study was conducted in a randomized complete block design at the four irrigation levels 50 (I1), 75 (I2), 100 (I3 or non-stress treatment) and 125 (I4) percent of crop's water requirement with three replications in Urmia region in Iran in order to irrigation scheduling of black gram using indices such as canopy temperature (Tc), crop water stress index (CWSI), relative water content (RWC), leaf water potential (LWP), soil water (SW) and penetration resistance (Q) of soil under one-row drip irrigation. The plant irrigation scheduling was performed by using the experimental crop water stress index (CWSI) method. The upper and lower baseline equations as well as CWSI were calculated for the three treatments of I1, I2 and I3 during the plant growth period. Using the extracted baselines, the mean CWSI values for the three treatments of I1, I2 and I3 were calculated to be 0.37, 0.23 and 0.15, respectively, during the growth season. Finally, using CWSI, the necessary equations were provided to determine the irrigation schedule for the four growing stages of black gram, i.e. floral induction-flowering, pod formation, seed and pod filling and physiological maturity, as (Tc - Ta)c = 1.9498 - 0.1579(AVPD), (Tc - Ta)c = 4.4395 - 0.1585(AVPD), (Tc - Ta)c = 2.4676 - 0.0578(AVPD) and (Tc - Ta)c = 5.7532 - 0.1462(AVPD), respectively. In this study, soil and crop indices, which were measured simultaneously at maximum stress time, were used as a complementary index to remove CWSI constraints. It should be noted that in Urmia, the critical difference between the canopy temperature and air temperature (Tc - Ta), soil penetration resistance (Q), soil water (SW) and relative water content (RWC) for the whole growth period of black gram were - 0.036 °C, 10.43 MPa and 0.14 cm3 cm-3 and 0.76, respectively. Ideal point error (IPE) was also used to estimate RWC, (Tc - Ta) and LWP as well as to select the best regression model. According to the results, black gram would reduce its RWC less through reducing its transpiration and water management. Therefore, it can be used as a low-water-consuming crop. Furthermore, in light of available facilities, the farmer can use the regression equations between the obtained soil and plant indices and the critical boundaries for the irrigation scheduling of the field.
-
10.
Unraveling the role of plant growth-promoting rhizobacteria in the alleviation of arsenic phytotoxicity: A review.
Mondal, S, Pramanik, K, Ghosh, SK, Pal, P, Mondal, T, Soren, T, Maiti, TK
Microbiological research. 2021;:126809
Abstract
The toxic metalloid arsenic (As), is a major pollutant of soil and water, imposing severe health concerns on human lives. It enters the food chain mainly through As-contaminated crops. The uptake, translocation and accumulation of As in plant tissue are often controlled by certain soil-inhabiting microbial communities. Among them, indigenous, free-living As-resistant plant growth-promoting rhizobacteria (PGPR) plays a pivotal role in As-immobilization. Besides, the plant's inability to withstand As after a threshold level is actively managed by these PGPR increasing As-tolerance in host plants by a synergistic plant-microbe interaction. The dual functionality of As-resistant PGPR i.e., phytostimulation and minimization of As-induced phytotoxic damages are one of the main focal points of this review article. It is known that such PGPR having the functional arsenic-resistant genes (in ars operon) including As-transporters, As-transforming genes contributed to the As accumulation and detoxification/transformation respectively. Apart from assisting in nutrient acquisition and modulating phytohormone levels, As-resistant PGPR also influences the antioxidative defense system in plants by maneuvering multiple enzymatic and non-enzymatic antioxidants. Furthermore, they are effective in reducing membrane damage and electrolyte leakage in plant cells. As-induced photosynthetic damage is also found to be salvaged by As-resistant PGPR. Briefly, the eco-physiological, biochemical and molecular mechanisms of As-resistant PGPR are thus elaborated here with regard to the As-exposed crops.