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1.
Copper environmental toxicology, recent advances, and future outlook: a review.
Rehman, M, Liu, L, Wang, Q, Saleem, MH, Bashir, S, Ullah, S, Peng, D
Environmental science and pollution research international. 2019;(18):18003-18016
Abstract
Copper (Cu) is one of the micronutrients needed by living organisms. In plants, Cu plays key roles in chlorophyll formation, photosynthesis, respiratory electron transport chains, oxidative stress protection as well as protein, carbohydrate, and cell wall metabolism. Therefore, deficiency of Cu can alter various functions of plant metabolism. However, Cu-based agrochemicals have traditionally been used in agriculture and being excessively released into the environment by anthropogenic activities. Continuous and extensive release of Cu is an imperative issue with various documented cases of phytotoxicity by the overproduction of reactive oxygen species (ROS) and damage to carbohydrates, lipids, proteins, and DNA. The mobility of Cu from soil to plant tissues has several concerns including its adverse effects on humans. In this review, we have described about importance and occurrence of Cu in environment, Cu homeostasis and toxicity in plants as well as remediation and progress in research so far done worldwide in the light of previous findings. Furthermore, present review provides a comprehensive ecological risk assessment on Cu in soils and thus provides insights for agricultural soil management and protection.
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2.
Soil compaction and the architectural plasticity of root systems.
Correa, J, Postma, JA, Watt, M, Wojciechowski, T
Journal of experimental botany. 2019;(21):6019-6034
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Abstract
Soil compaction is a serious global problem, and is a major cause of inadequate rooting and poor yield in crops around the world. Root system architecture (RSA) describes the spatial arrangement of root components within the soil and determines the plant's exploration of the soil. Soil strength restricts root growth and may slow down root system development. RSA plasticity may have an adaptive value, providing environmental tolerance to soil compaction. However, it is challenging to distinguish developmental retardation (apparent plasticity) or responses to severe stress from those root architectural changes that may provide an actual environmental tolerance (adaptive plasticity). In this review, we outline the consequences of soil compaction on the rooting environment and extensively review the various root responses reported in the literature. Finally, we discuss which responses enhance root exploration capabilities in tolerant genotypes, and to what extent these responses might be useful for breeding. We conclude that RSA plasticity in response to soil compaction is complex and can be targeted in breeding to increase the performance of crops under specific agronomical conditions.
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3.
Zinc biofortification of cereals-role of phosphorus and other impediments in alkaline calcareous soils.
Akhtar, M, Yousaf, S, Sarwar, N, Hussain, S
Environmental geochemistry and health. 2019;(5):2365-2379
Abstract
Alkaline calcareous soils are deficient in plant nutrients; in particular, phosphorus (P) and zinc (Zn) are least available; their inorganic fertilizers are generally applied to meet the demand of crops. The applied nutrients react with soil constituents as well as with each other, resulting in lower plant uptake. Phosphorus availability is usually deterred due to lime content, while Zn availability is largely linked with alkalinity of the soil. The present manuscript critically discusses the factors associated with physicochemical properties of soil and other interactions in soil-plant system which contribute to the nutrients supply from soil, and affect productivity and quality attributes of cereals. Appropriate measures may possibly lessen the severity of nutritional disorder in cereal and optimize P and Zn concentrations in grain. Foliar Zn spray is found to escape most of the soil reactions; thus, Zn bioavailability is higher either through increase in grain Zn or through decrease in phytate content. The reactivity of nutrients prior to its uptake is deemed as major impediments in Zn biofortification of cereals. The article addresses physiological limitation of plants to accumulate grain Zn and the ways to achieve biofortification in cereals, while molecular mechanism explains how it affects nutritional quality of cereals. Moreover, it highlights the desirable measures for enhancing Zn bioavailability, e.g., manipulation of genetic makeup for efficient nutrient uptake/translocation, and also elucidates agronomic measures that help facilitate Zn supply in soil for plant accumulation.
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4.
WASH for WORMS: A Cluster-Randomized Controlled Trial of the Impact of a Community Integrated Water, Sanitation, and Hygiene and Deworming Intervention on Soil-Transmitted Helminth Infections.
Vaz Nery, S, Traub, RJ, McCarthy, JS, Clarke, NE, Amaral, S, Llewellyn, S, Weking, E, Richardson, A, Campbell, SJ, Gray, DJ, et al
The American journal of tropical medicine and hygiene. 2019;(3):750-761
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Abstract
Water, sanitation, and hygiene (WASH) interventions have been proposed as an important complement to deworming programs for sustainable control of soil-transmitted helminth (STH) infections. We aimed to determine whether a community-based WASH program had additional benefits in reducing STH infections compared with community deworming alone. We conducted the WASH for WORMS cluster-randomized controlled trial in 18 rural communities in Timor-Leste. Intervention communities received a WASH intervention that provided access to an improved water source, promoted improved household sanitation, and encouraged handwashing with soap. All eligible community members in intervention and control arms received albendazole every 6 months for 2 years. The primary outcomes were infection with each STH, measured using multiplex real-time quantitative polymerase chain reaction. We compared outcomes between study arms using generalized linear mixed models, accounting for clustering at community, household, and individual levels. At study completion, the integrated WASH and deworming intervention did not have an effect on infection with Ascaris spp. (relative risk [RR] 2.87, 95% confidence interval [CI]: 0.66-12.48, P = 0.159) or Necator americanus (RR 0.99, 95% CI: 0.52-1.89, P = 0.987), compared with deworming alone. At the last follow-up, open defecation was practiced by 66.1% (95% CI: 54.2-80.2) of respondents in the control arm versus 40.2% (95% CI: 25.3-52.6) of respondents in the intervention arm (P = 0.005). We found no evidence that the WASH intervention resulted in additional reductions in STH infections beyond that achieved with deworming alone over the 2-year trial period. The role of WASH on STH infections over a longer period of time and in the absence of deworming remains to be determined.
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Effects of Farming Activities on the Biogeochemistry of Mercury in Rice-Paddy Soil Systems.
Tang, W, Su, Y, Gao, Y, Zhong, H
Bulletin of environmental contamination and toxicology. 2019;(5):635-642
Abstract
The biogeochemistry of mercury (Hg) in rice-paddy soil systems raises concerns, given that (1) the redox potential in paddy soil favors Hg methylation and (2) rice plants have a strong ability to accumulate methylmercury (MeHg), making rice an important source for MeHg exposure to humans. Therefore, all factors affecting the behavior of Hg in rice-paddy soils might impact Hg accumulation in rice, with its subsequent potential risks. As a typical wetland, paddy soils are managed by humans and affected by anthropogenic activities, such as agronomic measures, which would impact soil properties and thus Hg biogeochemistry. In this paper, we reviewed recent advances in the effects of farming activities including water management, fertilizer application and rotation on Hg biogeochemistry, trying to elucidate the factors controlling Hg behavior and thus the ecological risks in rice-paddy soil systems. This review might provide new thoughts on Hg remediation and suggest avenues for further studies.
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Analyses of artificial morel soil bacterial community structure and mineral element contents in ascocarp and the cultivated soil.
Zhang, F, Long, L, Hu, Z, Yu, X, Liu, Q, Bao, J, Long, Z
Canadian journal of microbiology. 2019;(10):738-749
Abstract
This study explored the differences among various artificial morel cultivations as well as the factors that influence these differences, including soil bacterial community structure, yield, and mineral element contents of ascocarp and the cultivated soil. High-throughput sequencing results revealed that the dominant bacterial phyla in all the samples, including Proteobacteria, Acidobacteria, Chloroflexi, Bacteroides, and Gemmatimonadetes, were found not only in morel soils (experimental group) but also in wheat soil (control group); the highest richness and diversity in the soil bacteria were observed during the primordial differentiation stage. The M6 group exhibited the highest yield (271.8 g/m2) and had an unexpectedly high proportion of Pseudomonas (25.30%) during the primordial differentiation stage, which was 1.77∼194.62 times more than the proportion of Pseudomonas in other samples. Pseudomonas may influence the growth of morel. The mineral element contents of the different soil groups and the ascocarp were determined by electrothermal digestion and inductively coupled plasma mass spectrometry. The results revealed that morel had high enrichment effects on phosphorus (P, bioconcentration factor = 16.83), potassium (K, 2.18), boron (B, 1.47), zinc (Zn, 1.36), copper (Cu, 1.15), and selenium (Se, 2.27). P levels were the highest followed by Se and K, and the mineral element contents in ascocarp were positively correlated with the soil element contents.
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Mode of action and fate of microcystins in the complex soil-plant ecosystems.
Redouane, EM, El Amrani Zerrifi, S, El Khalloufi, F, Oufdou, K, Oudra, B, Lahrouni, M, Campos, A, Vasconcelos, V
Chemosphere. 2019;:270-281
Abstract
Over the last decades, global warming has increasingly stimulated the expansion of cyanobacterial blooms in freshwater ecosystems worldwide, in which toxic cyanobacteria produce various congeners of cyanotoxins, mainly dominated by microcystins (MCs). MCs introduced into agricultural soils have deleterious effects on the germination, growth and development of plants and their associated microbiota, leading to remarkable yield losses. Phytotoxicity of MCs may refer to the inhibition of phosphatases activity, generating deleterious reactive oxygen species, altering gene functioning and phytohormones translocation within the plant. It is also known that MCs can pass through the root membrane barrier, translocate within plant tissues and accumulate into different organs, including edible ones. Also, MCs impact the microbial activity in soil via altering plant-bacterial symbioses and decreasing bacterial growth rate of rhizospheric microbiota. Moreover, MCs can persist in agricultural soils through adsorption to clay-humic acid particles and results in a long-term contact with the plant-microflora complex. However, their bioavailability to plants and half-life in soil seem to be influenced by biodegradation process and soil physicochemical properties. This review reports the latest and most relevant information regarding MCs-phytotoxicity and impact on soil microbiota, the persistence in soil, the degradation by native microflora and the bioaccumulation within plant tissues.
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8.
Study on shear behavior of kaolinite contaminated by heavy metal Cu (II).
Zhang, Z, Chen, Y, Fang, J, Guo, F
Environmental science and pollution research international. 2019;(14):13906-13913
Abstract
Numerous studies have shown that the invasion of the chemicals plays an important role on the geomechanical properties of the soil. This article aims to investigate the shear behavior of contaminated soil by laboratory tests and develop an extended shear strength model on the basis of the experimental results. In order to explicitly evaluate the effect of solution concentration on the shear strength behavior of soil, the remolded samples of kaolinite mixed with different concentrations of CuCl2 solutions were prepared to carry out a series of consolidated-undrained triaxial shear strength tests. The results indicate that different CuCl2 solution concentrations have significant influence on the shear strength property of kaolinite. With the increase of CuCl2 solution concentration, the shear strength of soil displays a declining tendency, and the strength properties including cohesion and internal friction angle are also reduced, which indicates the Cu (II) that existed in the soil samples has deteriorated the soil strength strongly. Based on the experimental results, an extended Mohr-Coulomb strength model for contaminated soils has been proposed by introducing osmotic suction as a macro variable parameter. The conclusions in this study can provide reference for pollution prevention of existing and future foundations.
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9.
The impact of crop residue biochars on silicon and nutrient cycles in croplands.
Li, Z, Song, Z, Singh, BP, Wang, H
The Science of the total environment. 2019;:673-680
Abstract
Croplands are subjected to nutrient loss mainly due to agricultural harvest. Silicon has beneficial effect on alleviating nutrient imbalance-induced stress. Addition of crop residue biochars to cropland can import both silicon (Si) and nutrients (e.g. nitrogen, phosphorus and potassium) directly and enhance their availability. Nevertheless, how the concentrations of Si and nutrients vary among the biochars derived from different feedstocks, and how crop Si and nutrients respond to addition of biochars to croplands have not yet been clarified comprehensively and quantitatively. Total and essentially available Si and nutrients in crop residue biochars and their relationships with crop Si and nutrient uptake were investigated by using data collected from peer reviewed papers. Biochars derived from rice husk, rice straw, corn stover, sugarcane residues, and wheat straw, which were produced by thermal pyrolysis at 150-900 °C under oxygen-limited conditions, averagely contained 20.03% (n = 10), 12.39% (n = 16), 10.25% (n = 7), 7.40% (n = 9), and 3.34% (n = 3) of total Si, respectively. By contrast, crop residue biochars contained, on average, 1.23% nitrogen (n = 461), 0.32% phosphorus (n = 209), 0.56% sulfur (n = 187), 2.73% potassium (n = 197), 1.17% calcium (n = 123), and 0.54% magnesium (n = 111), which largely depended on and varied widely with their feedstocks and pyrolysis conditions. On average, 32.6%-54.9% of the total Si and nutrients (excluding nitrogen) in crop residue biochars were essentially available. Hence, addition of crop residue biochars to croplands may contribute a considerable amount of total and available Si and nutrients, except available inorganic nitrogen. The increasing amounts of Si and nutrient input with addition of biochars had positive and statistically significant (p < 0.05) relationships with the increment of crop Si and nutrient uptake, respectively. In conclusion, addition of crop residue biochars can be beneficial to sustainable agriculture system through concerting Si and nutrient cycling in croplands.
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10.
Interactions between plants and soil shaping the root microbiome under abiotic stress.
Hartman, K, Tringe, SG
The Biochemical journal. 2019;(19):2705-2724
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Abstract
Plants growing in soil develop close associations with soil microorganisms, which inhabit the areas around, on, and inside their roots. These microbial communities and their associated genes - collectively termed the root microbiome - are diverse and have been shown to play an important role in conferring abiotic stress tolerance to their plant hosts. In light of growing concerns over the threat of water and nutrient stress facing terrestrial ecosystems, especially those used for agricultural production, increased emphasis has been placed on understanding how abiotic stress conditions influence the composition and functioning of the root microbiome and the ultimate consequences for plant health. However, the composition of the root microbiome under abiotic stress conditions will not only reflect shifts in the greater bulk soil microbial community from which plants recruit their root microbiome but also plant responses to abiotic stress, which include changes in root exudate profiles and morphology. Exploring the relative contributions of these direct and plant-mediated effects on the root microbiome has been the focus of many studies in recent years. Here, we review the impacts of abiotic stress affecting terrestrial ecosystems, specifically flooding, drought, and changes in nitrogen and phosphorus availability, on bulk soil microbial communities and plants that interact to ultimately shape the root microbiome. We conclude with a perspective outlining possible directions for future research needed to advance our understanding of the complex molecular and biochemical interactions between soil, plants, and microbes that ultimately determine the composition of the root microbiome under abiotic stress.