1.
QTL mapping and candidate gene analysis of seed vigor-related traits during artificial aging in wheat (Triticum aestivum).
Shi, H, Guan, W, Shi, Y, Wang, S, Fan, H, Yang, J, Chen, W, Zhang, W, Sun, D, Jing, R
Scientific reports. 2020;(1):22060
Abstract
High vigor seeds have greater yield potential than those with low vigor; however, long-term storage leads to a decline in this trait. The objective of this study was to identify quantitative trait loci (QTLs) for seed vigor-related traits under artificial aging conditions using a high-density genetic linkage map of wheat (Triticum aestivum) and mine the related candidate genes. A doubled haploid population, derived from a cross between Hanxuan 10 × Lumai 14, was used as the experimental material. Six controlled-environment treatments were set up, i.e. the seeds were aged for 0, 24, 36, 48, 60, and 72 h at a high temperature (48 °C) and under high humidity (relative humidity 100%). Eight traits including seed germination percentage, germination energy, germination index, seedling length, root length, seedling weight, vigor index, and simple vigor index were measured. With the prolongation of artificial aging treatment, these traits showed a continuous downward trend and significant correlations were observed between most of them. A total of 49 additive QTLs for seed vigor-related traits were mapped onto 12 chromosomes (1B, 2D, 3A, 3B, 3D, 4A, 4D, 5A, 5B, 5D, 6D, and 7A); and each one accounted for 6.01-17.18% of the phenotypic variations. Twenty-five pairs of epistatic QTLs were detected on all chromosomes, except for 5D, 6A, and 7D, and each epistasis accounted for 7.35-26.06% of the phenotypic variations. Three additive QTL hot spots were found on chromosomes 5A, 5B, and 5D, respectively. 13 QTLs, QGEe5B, QGIe5B, QSLc5B, QSLd5B, QSLf5B, QRLd5B, QRLe5B, QRLf5B, QVId5B, QVIe5B, QVIf5B, QSVId5B, and QSVIe5B, were located in the marker interval AX-94643729 ~ AX-110529646 on 5B and the physical interval 707,412,449-710,959,479 bp. Genes including TRAESCS5B01G564900, TRAESCS5B01G564200, TRAESCS5B01G562600, TraesCS5B02G562700, TRAESCS5B01G561300, TRAESCS5B01G561400, and TRAESCS5B01G562100, located in this marker interval, were found to be involved in regulating the processes of carbohydrate and lipid metabolism, transcription, and cell division during the germination of aging seeds, thus they were viewed as candidate genes for seed viability-related traits. These findings provide the basis for the seed-based cloning and functional identification of related candidate genes for seed vigor.
2.
Comparison study of zinc nanoparticles and zinc sulphate on wheat growth: From toxicity and zinc biofortification.
Du, W, Yang, J, Peng, Q, Liang, X, Mao, H
Chemosphere. 2019;:109-116
Abstract
ZnO nanoparticles (NPs) are studied as a potential solution to alleviate Zn deficiency in human diet due to their special physicochemical properties. However, information for food quality and safety in NP-treated crops is limited. The effects of ZnO NPs and ZnSO4 on germination and growth of wheat (Triticum aestivum L.) were studied in germination and pot experiments. Zn content increased significantly, ZnO NPs were more effective than ZnSO4 at increasing grain Zn content, but less effective at increasing leaf Zn, and no ZnO NPs were detected in the wheat tissues by NP-treatments, indicated by XRD. Both ZnO NPs and ZnSO4 at moderate doses increased grain yield and biomass. Compared with control, the maximum grain yield and biomass of wheat treated with ZnO NPs and ZnSO4 were increased by 56%, 63% and 55%, 72%, respectively. ZnSO4 was more toxic than ZnO NPs at high doses as measured by the inhibitory effects in seed germination, root length, shoot length and dry biomass of seedlings. Structural damage in roots and variation in enzyme activities were greater with ZnSO4 than with ZnO NPs. ZnO NPs did not cause toxicity different from that of ZnSO4, which indicates that ZnO NPs used under the current experimental conditions did not cause Nano specific risks.
3.
Further mapping of quantitative trait loci for female sterility in wheat (Triticum aestivum L.).
Dou, B, Hou, B, Wang, F, Yang, J, Ni, Z, Sun, Q, Zhang, YM
Genetics research. 2010;(1):63-70
Abstract
Epistasis underlying fertility plays an important role in crop breeding. Although a new female sterile mutant in wheat, XND126, has been identified and a major quantitative trait locus (QTL), taf1, for the female sterility has been mapped, the genetic architecture of the female sterility needs to be further addressed. To identify the interaction involving the gene(s) controlling the female sterility, an investigation was carried out for the seed setting ratio in an F2 population derived from the cross between XND126 and Gaocheng 8901. Among 1250 simple sequence repeat (SSR) primer pairs in the whole genome, a total of 21 markers, obtained by recessive class approach, along with other ten tightly linked markers on reference maps in wheat, were used to survey 243 F2 individuals. As a result, 28 markers were mapped into five genetic linkage groups. The performance for female sterility for each F2 individual was evaluated simultaneously at the Urumqi and Huai'an experimental stations in 2006-2007. The two phenotypic datasets along with marker information were jointly analysed in the detection of QTL using penalized maximum likelihood approach. A total of six QTLs, including two main-effect QTLs, three epistatic QTLs and one environmental interaction and accounting for 0.67-24.55% of the total phenotypic variance, were identified. All estimated effects accounted for 53.26% of the total phenotypic variation. The taf1 detected in previous study was also located on the same marker interval on chromosome 2DS. These results enrich our understanding of the genetic basis of the female sterility.